Jodha Akbar is an epic drama that focuses on how the marriage policy brings the love of Jodha Bai and Akbar in a measure that has changed the destiny of India. This drama period also describes the wars of this time and the relations between the Mughals and Rajputs and how Jodha and Akbar face trials and tribulations to be together. The drama also focuses on the operating Queens, courts, courtesans, ministers and their influence on the love story of Akbar and Jodha Bai. Finally, the show also portrays how Mughal Emperor Jalaluddin Muhammad acquires the title 'Akbar' from the people of India.
Jalaluddin Mohammad, a fearless warrior, son of Emperor Humayun and Hameeda Bano Begum, became the Emperor of the Mughal dynasty at a very young age. He is under the influence of Bairam Khan, his reagent, and Maham Anga, his foster mother. Bairam Khan has taught Jalal to be a ruthless and cruel ruler, and spread his rule by fear, conquer people by the sword. Jalal, following Bairam Khan's ideals becomes a heartless and fearsome ruler, whom the people dislike. He wants to conquer the entire Hindustaan, and presently, he is eyeing the golden Rajputana.
Jodha Bai, princess of Amer, daughter of Raja Bharmal and Rani Mainavati, is a kind and intelligent young girl, who believes in ruling people's hearts and that rule is spread by love and togetherness, not by force.
She decides to go to a far away temple to offer prayers on her birthday, along with Moti Bai, her friend and aide. While offering prayers there, a band of mughal soldiers come and start looting the jewellery of the Goddess. When Moti Bai tries to stop them, they try to molest her. Angered at this, Jodha asks who could be so cruel as to rob people of their religions, to which a temple person replied Jalaluddin Mohammad. Jodha pledges to destroy Jalal and present his head in front of the Goddess. Meanwhile, Moti Bai, embarrassed by the turn of events, decides to commit suicide, but Jodha prevents her. This makes Jodha even more vengeful.
Jalal punishes a man for stealing his shoes by cutting off his legs. He decides to meet Sharifuddin, a subedar of, close to Amer, so that he can wait for the right moment to attack the unaware Rajputs.